miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|159768824|gb|EG391953.1|EG391953 CGATTTTTTTTTTTTTTTTTTGACCAACAAAATGGAACAAGTTCATATGTACTCCCTCCGTTCCTAAATATAAGTCTTTA
TAGAGATTTCATTGCGTACTACATACGAAAAAATGAGTGAATCTACACTCTAAAATACGTCTATATACATCCGTATGTAG
TCTTTATTGAAATCTCTAAAAAGACTTATATTTAGAAACGGAGGGAGTATTCACCATGTTCGACCACCACAGGAACCAAC
AGTTAAAATACACGGAGCACCGATTTTCCAGCCACTACAGTACTGAGACACGACTTAACTAAGACTCGTCCTGACTTATC
TAGTTTTTATTGCCAACACAGTTATACAACCATTGTAACTTACAGGCTCCCCCACCTACTTGTATACCACCTGAGTACAA
ACCCTGGACCCAAAAAGCAGCTACACATAATTATACAAGAAAGAAAAACTCGAATACCCAAATTATCTGCAGCAATGCAT
TGTATGAAGAGCACCCCCGGCGTTGTACAGATCAGATTAGGGGAAATCCGGCGCGCGATGATCCTTGGTTATTCCCTGGG
CCTAGCAAGCCACAGAGAGCTCAGCGCGCGCAAACGCGAGAAGTAGTCATGTATAGCTAGGAGAGCACGGGAGGCCTGAC
GGATCGTCAAGATTCGCTGCATTTGATGCAAGGTCTGCTGTCGCAGGTTGTCAGCCTGGCGANNNAAGTTCTCGAGTGTT
CCAAGCTTGCCCATGGACATGGCCATCTGGCCCATGTAGTTTGCAACATTCCCTGAAGAACCAGAGNAGGAACCCAGAGA
TCCAGCCAAAGTCTCTGCCAGTGATTGCTGCAATGCTTCCATCCC




Most similar to sp|Q41558|HBP1C_WHEAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q41558|HBP1C_WHEAT Transcription factor HBP-1b(c1) (Fragment)
           OS=Triticum aestivum PE=1 SV=2
          Length = 476

 Score =  114 bits (284), Expect = 1e-24
 Identities = 62/82 (75%), Positives = 66/82 (80%)
 Frame = -1

Query: 845 GMEALQQSLAETLAXXXXXXXXXXGNVANYMGQMAMSMGKLGTLENXXRQADNLRQQTLH 666
           GMEALQQSLAETLA          GNVA+YMGQMAM+MGKLGTLEN  RQADNLR QTL 
Sbjct: 379 GMEALQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLGTLENFLRQADNLRLQTLQ 438

Query: 665 QMQRILTIRQASRALLAIHDYF 600
           QMQRILT RQ++RALLAI DYF
Sbjct: 439 QMQRILTTRQSARALLAISDYF 460